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Modules

All available tools from the ARDA platform

RNAWann 3D Structure Prediction

RNAWann — Folding Trajectory Database

Browse and query a database of complete RNA 3D structure folding trajectories.

DatabaseFolding trajectories
Open module →Documentation →

Wann-Switch — Conformation Switching

Tool for analyzing and predicting RNA conformational switching.

Conformation switching
Open module →Documentation →

RNA 3D Structure Prediction

Predict the 3D structure of an RNA sequence using energy-based optimization. Currently in development.

bead-springsRASPDFIRErsRNASP
Open module →Documentation →

RNAdvisor2 3D prediction quality assesment

RNAdvisor2

Evaluate the quality of any RNA 3D structure in PDB format using 11 metrics and 5 scoring functions

RMSDTM-scorelDDTGDT
Open module →Documentation →

DivideFold — Secondary Structure Prediction

DivideFold

Predict the secondary structure of long RNA sequences using a divide-and-conquer folding strategy.

Secondary structureCPU-only
Open module →Documentation →

Computed RNA database

ARDA

Browse RNA sequence that have already been computed

DataBaseMongoDB
Open module →Documentation →